
Boutique hotels in Shinjuku
Find and book unique boutique hotels on Airbnb
Quick stats about boutique hotels in Shinjuku

Total holiday rentals
Explore 60 holiday rentals in Shinjuku

Nightly prices starting at
Shinjuku holiday rentals start at $90 SGD per night before taxes and fees

Verified guest reviews
Over 5,610 verified reviews to help you choose

Rentals with dedicated workspaces
10 properties have a dedicated workspace

Wifi availability
60 of Shinjuku holiday rentals include wifi access

Popular amenities for guests
Guests love Kitchen, Wifi and Pool across Shinjuku rentals

4.7 Average rating
Shinjuku stays receive an average rating of 4.7 out of 5 from guests

Nearby attractions
Shinjuku’s top spots include Shinjuku Gyoen National Garden, Sunshine Aquarium and Tokyo Metropolitan Theatre
Top-rated boutique hotels in Shinjuku
Guests agree: these boutique hotels are highly rated for location, cleanliness and more.

The Hideout Tokyo -(Double Room)-
We're Central Tokyo's family run hotel for those who want to travel in style. Our petite 5-room hotel offers reasonably priced compact yet cozy accommodation with many of the features you'd expect from a larger,branded property. Private shower&sink. We're located walking distance from many of Tokyo's finest sightseeing spots and just a 4/2 minute walk from JR Yamanote line,Subway Hibiya line connecting you quickly to the rest of the city. ※We’re legal hotel with hotel permit from the government

DOMO HOTEL-1
DOMO HOTEL is located in the Shinjuku area, within walking distance of JR Shin-Okubo Station and Shinjuku Station. A convenience store can be reached in 30 seconds. There are many chain restaurants, cafes, post offices and drug stores around the hotel, taking care of the needs of tourists in every possible way. In order to provide travelers with a brand-new accommodation experience, the hotel has only 12 rooms. From the moment you step into the hotel door, an unprecedented journey begins quietly

Standard Room|Accessible|20mShinjuku|Kagurazaka
Barrier-free room ideal for families or small groups. The ground-floor 30 m² twin sleeps up to 4 with two Simmons double beds. In-room: free Wi-Fi, A/C, mini-fridge, air-purifier, safe, TV and hair-dryer. Bathroom stocked with shampoo, conditioner, body & hand soap, towels, gowns, slippers, toothbrush set, cotton kit, razor, sponge and brush. No on-site parking or washer—please use nearby coin lots and laundromats. Fee-based rentals (limited): hair iron, board games, projector, Fire TV Stick.

④ Newly built in 2020/Queen bed/Modern bathroom/Rain shower Sunshine City 3 minutes
Newly built with travelers in mind. The rooms are spacious with Queen size beds (practically unheard-of in Japan). Smart TV, Wi-Fi, tea and coffee. The bathrooms are fashionable, with large walk in rain showers. LED mirrors to get you ready for whatever lighting you will encounter. Rooms have a bar fridge, microwave and kettle for you to store and prepare ready-made meals and drinks. All rooms come equipped with Air-conditioning, ceiling fans and black-out curtains. Ample storage space also!

Nippori train 2min 6Bed 3WC 2Bath Ueno Akihabara
「MoRi House IN 西日暮里」は 2019年新築の三階建一棟ビル3LDK97㎡ 寝室3室・トイレ3室・シャワー1室・バスタブ1室・キッチン1室 # 3寝室 -寝室A( 1階、シングルベッド2床個室) -寝室B ( 3階、ダブルベッド2床備えた個室) -寝室C (3階、ダブルベット2床備えた個室) 家族、親友同士で自宅感覚で寛げる快適空間を提供致します。 普通のホテルと違い、システム対面キッチンが備え付けており、就寝は一階と三階別々の部屋で、皆んなの集まりは二階のリビングで、キッチン設備を使ってお好きの料理も作って楽しめる事が可能です。 旅先でも自宅にいるような「家族団欒」気分を楽しむ事が出来ます。 当施設までのアクセスはとても便利です。 成田空港から新三河島駅までは京成線一本で着きます。 新三河島駅からは歩いて3分の距離に位置しています。 その他最寄り駅までの徒歩所要時間 JP「西日暮里駅」10分、東京メトロ千代田「西日暮里駅」8分 バス停留所も近くにあります。 届出・登録番号 旅館業法の許可番号 | 東京都保健所 | 30荒保環き(三)第25号

Luxury Art Penthouse | Tokyo Bay Ocean View |10pax
Welcome to Art House 日の出, one-of-a-kind penthouse overlooking spectacular Tokyo Bay.Created by visionary creators and architects, this top-floor private residence, which blends contemporary art with traditional Japanese aesthetics, just opened in January 2026 as an immersive space.This entire 87㎡ floor is reserved exclusively for your family, group of friends (up to 10 guests). Designed as a “Art Gallery Hotel” offers a premium, memorable stay beyond the ordinary accommodation experience.

condominium with everything you need for dailylife
・“Only 13 minutes from Shibuya” Convenient access to central Tokyo, where you can relax in a quiet living environment after enjoying sightseeing and shopping. ・Flexible accommodation styles allow you to flexibly adjust the length of stay and type of room, from sightseeing to work, short-term stays to long-term stays. ・Many residents live in share houses who are fluent in English, creating an international and diverse community. You can enjoy new friends and international exchange.

12-min walk to Sensoji - Boutique Hotel
一遊ホテル浅草 is a boutique hotel located in Taito City, offering excellent access to major transportation. Nestled in a quiet residential neighborhood, yet close to Tokyo’s most popular sightseeing spots, this is an ideal base for tourists, couples, and business travelers – only a 12-minute walk from the famous Sensoji Temple, where you can enjoy the blend of traditional culture and modern Tokyo vibes. Plenty of dining options nearby, from traditional Japanese food to stylish cafes.

3 min to Sensoji | Family 2BR w/kitchen & laundry
Opened in the summer of 2021, this apartment hotel was designed by a well-known Japanese designer. The building has 9 floors and 16 Quad rooms, ideal for families or small groups of 4–5 guests. The hotel is located along the main road near Senso-ji Temple and Asakusa Shrine. Front desk hours: 10:00 AM – 8:00 PM Online customer support: 8:00 PM – 12:00 AM Late-night front desk service: 10:00 PM – 6:00 AM (available on five nights per week)

1 min from Koenji Station/BnA Koenji Room 2F
BnA Home Koenji is an independent art hotel created by the Bed & Art Project (BnA)—an ambitious and experimental hospitality concept that blends art, community, and immersive travel. At BnA, guests don't just stay at a hotel—they stay inside a work of art. Each room is a one-of-a-kind collaboration, designed and built by local artists, architects, textile designers, and carpenters to create a deeply personal and unforgettable experience.

TheMillennialsShibuya/Mixed Smart Pod/1 Guest
Welcome to The Millennials Shibuya, a futuristic accommodation facility equipped with the world's first IOT-equipped "Smart Pod" and a lounge with a coworking space. In addition, there are plenty of common spaces, including a 24-hour shared lounge, a 24-hour self-kitchen, a 24-hour working lounge, a shared shower and toilet, and a shared laundry. 20% of the total area of the hotel is allocated to the common area.

PEGASUS HOTEL (Japanese room) 502
Hi This is Pegasus Hotel New open in 2020, we have two types of standard double rooms and family rooms. The environment is clean and tidy. It is a three-minute walk from Asakusa Bridge Station. , Every year will have Sumidagawa Fireworks Festival, Japanese traditional culture boat house you also can have a nice dinner in the boat, you can have a good time in nearby Tokyo Bay Odaiba Rainbow Bridge, etc.
Popular amenities for Shinjuku boutique hotels
Family-friendly boutique hotels

No Service Hotel 301 / 7 min to Asakusa

Room 202, 3 mins walk from Asakusabashi Station, Asakusa, Akihabara, Ueno neighborhood, kitchenware, kitchen, washing machine, direct access to Haneda and Narita Airport

4 subway 5 min walk! Japanese style Tatami&Futon

Entire Floor for 8 · 540sqft · Near Tokyo Tower

Tokyo Home near Disney for 2|Cozy Room|Kitchen

Hotel Suite | 7 min JR Shin-Okubo | 4 min Subway

Luxury beds/10 min walk Shibuya/2 showers/5 beds

Rill Hotel Asakusa 401 Spacious, Comfortable, Quiet and Cozy
Boutique hotels with a patio

Elevator building, direct access to Narita and Haneda Airports, 5-minute walk to Skytree Station, kitchen, washing machine, Amin Hotel

4 bedrooms, 4 bathrooms, 4 washing machines, 4 kitchens, direct access to airport, washing machine, elevator building, 5 minutes walk to Skytree station

8 min to Yamanote Line | 3BR Family Suite | 49㎡

3 bathrooms, max 14 people, 5 min walk from Skytree station, 3 suites, direct access to airport, kitchen, washing machine, elevator

5 min walk to Skytree Station, direct access to airport and Disney, kitchen, washing machine, wifi, elevator, Amin Hotel

Shibuya direct access to Skytree subway 5 min walk 2 suites 2 bathrooms airport direct access kitchen washing machine elevator

Direct access to the airport, 5 minutes walk to Skytree Station, 2 suites, 2 bathrooms, kitchen, washing machine, elevator, Amin Hotel

TheMillennialsShibuya/Smart Pod Girls Only/1 Guest
Other boutique hotel holiday rentals

4 single beds in Tokyo/2 train stations: Studio B

Shinjuku 10mins! Relaxing room max 4ppl!

3F|8 minutes on foot from Shibuya Station! A hideaway for playing in Shibuya | Near live house | Up to 6 people | WIFI | Washing machine and dryer

4minSta|51㎡ 2BR|Gas Dryer|Hot Tub|Direct Airport

4New /organic stay/Tokyo/1 stop to Asakusa/Skytree/Cafe on-site/Breakfast included/ MAX 4 people

[1]2min walk Sta丨Shinjuku area丨free WIFI丨Single丨

Newly opened hotel-style t suite Subway 3 minutes

MANGADesign・2 mattress・Free simple breakfast& wifi
When is the best time to visit Shinjuku?
| Month | Jan | Feb | Mar | Apr | May | Jun | Jul | Aug | Sept | Oct | Nov | Dec |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg. price | $117 SGD | $116 SGD | $125 SGD | $161 SGD | $151 SGD | $142 SGD | $112 SGD | $93 SGD | $138 SGD | $141 SGD | $142 SGD | $126 SGD |
| Avg. temp | 6°C | 7°C | 10°C | 15°C | 19°C | 22°C | 26°C | 27°C | 24°C | 18°C | 13°C | 8°C |
Destinations to explore
- Pet-friendly rentals Shinjuku
- Loft rentals Shinjuku
- Serviced apartment rentals Shinjuku
- Smoking-friendly rentals Shinjuku
- Rentals with a cinema Shinjuku
- Rentals with a patio Shinjuku
- Family-friendly rentals Shinjuku
- Hostel rentals Shinjuku
- Aparthotel rentals Shinjuku
- Rentals with breakfast Shinjuku
- House rentals Shinjuku
- Flat rentals Shinjuku
- Waterfront rentals Shinjuku
- Rentals with a hot tub Shinjuku
- Rentals with outdoor seating Shinjuku
- Rentals with a fireplace Shinjuku
- Rentals with an EV charger Shinjuku
- Rentals with a washing machine and dryer Shinjuku
- Fitness-friendly rentals Shinjuku
- Hotel rooms Shinjuku
- Apartment rentals Shinjuku
- Villa rentals Shinjuku
- Boutique hotels Tokyo Prefecture
- Boutique hotels Japan
- Tokyo Sta.
- Shibuya Station
- Tokyo Disneyland
- Ginza Station
- Asakusa Sta.
- Akihabara Sta.
- Shimo-Kitazawa Sta.
- Tokyo Disney Resort
- Ikebukuro
- Tokyo Skytree
- Nippori Sta.
- Yokohama Sta.
- Otsuka Station
- Ueno Sta.
- Hakone-Yumoto Sta.
- Oshiage Sta.
- Tokyo Tower
- Yoyogi Park
- Kinshicho Sta.
- Takadanobaba Sta.
- Akasaka Sta.
- Kita-Senju Sta.
- Shinagawa
- Omiya Sta.
- Things to do Shinjuku
- Entertainment Shinjuku
- Tours Shinjuku
- Nature and outdoors Shinjuku
- Art and culture Shinjuku
- Sightseeing Shinjuku
- Food and drink Shinjuku
- Sports activities Shinjuku
- Things to do Tokyo Prefecture
- Nature and outdoors Tokyo Prefecture
- Sports activities Tokyo Prefecture
- Sightseeing Tokyo Prefecture
- Art and culture Tokyo Prefecture
- Tours Tokyo Prefecture
- Food and drink Tokyo Prefecture
- Entertainment Tokyo Prefecture
- Wellness Tokyo Prefecture
- Things to do Japan
- Food and drink Japan
- Entertainment Japan
- Tours Japan
- Nature and outdoors Japan
- Art and culture Japan
- Wellness Japan
- Sports activities Japan
- Sightseeing Japan







