
Boutique hotels in Shinjuku
Find and book unique boutique hotels on Airbnb
Quick stats about boutique hotels in Shinjuku

Total holiday rentals
Explore 60 holiday rentals in Shinjuku

Nightly prices starting at
Shinjuku holiday rentals start at $91 SGD per night before taxes and fees

Verified guest reviews
Over 5,610 verified reviews to help you choose

Rentals with dedicated workspaces
10 properties have a dedicated workspace

Wifi availability
60 of Shinjuku holiday rentals include wifi access

Popular amenities for guests
Guests love Kitchen, Wifi and Pool across Shinjuku rentals

4.7 Average rating
Shinjuku stays receive an average rating of 4.7 out of 5 from guests

Nearby attractions
Shinjuku’s top spots include Shinjuku Gyoen National Garden, Sunshine Aquarium and Tokyo Metropolitan Theatre
Top-rated boutique hotels in Shinjuku
Guests agree: these boutique hotels are highly rated for location, cleanliness and more.

Room 202, 3 mins walk from Asakusabashi Station, Asakusa, Akihabara, Ueno neighborhood, kitchenware, kitchen, washing machine, direct access to Haneda and Narita Airport
・ Airbnb does not have infant and child fees, so we will calculate the adult fee for all Infants and children must be booked as adults. Transportation is good, and there is almost no need to transfer to Haneda Airport or Narita Airport. Support is available in Japanese, Chinese and English. All rooms have a separate toilet and shower room, suite room, and kitchen for simple cooking. We also provide cooking utensils and dishes, so please feel free to use them. (Please note that we do not provide condiments, so please bring them with you) Shampoo, conditioner, body soap, hair dryer, bath towels, face towels, and toothbrushes are provided free of charge. (Installed in each room) An iron and ironing board are also available, so please feel free to use them. Laundry is available near the stairs on the 2nd floor, and one washing machine is available for free. A clean and stylish interior welcomes you.

The Hideout Tokyo -(Double Room)-
We're Central Tokyo's family run hotel for those who want to travel in style. Our petite 5-room hotel offers reasonably priced compact yet cozy accommodation with many of the features you'd expect from a larger,branded property. Private shower&sink. We're located walking distance from many of Tokyo's finest sightseeing spots and just a 4/2 minute walk from JR Yamanote line,Subway Hibiya line connecting you quickly to the rest of the city. ※We’re legal hotel with hotel permit from the government

DOMO HOTEL-1
DOMO HOTEL is located in the Shinjuku area, within walking distance of JR Shin-Okubo Station and Shinjuku Station. A convenience store can be reached in 30 seconds. There are many chain restaurants, cafes, post offices and drug stores around the hotel, taking care of the needs of tourists in every possible way. In order to provide travelers with a brand-new accommodation experience, the hotel has only 12 rooms. From the moment you step into the hotel door, an unprecedented journey begins quietly

Standard Room|Accessible|20mShinjuku|Kagurazaka
Barrier-free room ideal for families or small groups. The ground-floor 30 m² twin sleeps up to 4 with two Simmons double beds. In-room: free Wi-Fi, A/C, mini-fridge, air-purifier, safe, TV and hair-dryer. Bathroom stocked with shampoo, conditioner, body & hand soap, towels, gowns, slippers, toothbrush set, cotton kit, razor, sponge and brush. No on-site parking or washer—please use nearby coin lots and laundromats. Fee-based rentals (limited): hair iron, board games, projector, Fire TV Stick.

④ Newly built in 2020/Queen bed/Modern bathroom/Rain shower Sunshine City 3 minutes
Newly built with travelers in mind. The rooms are spacious with Queen size beds (practically unheard-of in Japan). Smart TV, Wi-Fi, tea and coffee. The bathrooms are fashionable, with large walk in rain showers. LED mirrors to get you ready for whatever lighting you will encounter. Rooms have a bar fridge, microwave and kettle for you to store and prepare ready-made meals and drinks. All rooms come equipped with Air-conditioning, ceiling fans and black-out curtains. Ample storage space also!

Luxury Art Penthouse | Tokyo Bay Ocean View |10pax
Welcome to Art House 日の出, one-of-a-kind penthouse overlooking spectacular Tokyo Bay.Created by visionary creators and architects, this top-floor private residence, which blends contemporary art with traditional Japanese aesthetics, just opened in January 2026 as an immersive space.This entire 87㎡ floor is reserved exclusively for your family, group of friends (up to 10 guests). Designed as a “Art Gallery Hotel” offers a premium, memorable stay beyond the ordinary accommodation experience.

12-min walk to Sensoji - Boutique Hotel
一遊ホテル浅草 is a boutique hotel located in Taito City, offering excellent access to major transportation. Nestled in a quiet residential neighborhood, yet close to Tokyo’s most popular sightseeing spots, this is an ideal base for tourists, couples, and business travelers – only a 12-minute walk from the famous Sensoji Temple, where you can enjoy the blend of traditional culture and modern Tokyo vibes. Plenty of dining options nearby, from traditional Japanese food to stylish cafes.

3 mins to Subway |Quad room with 2 double beds
I GO HOTEL is in central Shinjuku, a 3-minute walk to Higashi-Shinjuku Station (Fukutoshin Line, Exit B1) and 5 minutes to the Oedo Line, with direct access to Shibuya, Harajuku, Ikebukuro, and Roppongi. Shin-Okubo Station, Seibu-Shinjuku Station, Okubo Station, and Shinjuku Station are within walking distance. Near Kabukicho and Shin-Okubo, with 24-hour convenience stores, restaurants, drugstores, and Don Quijote nearby. Central yet quiet.

3 min to Sensoji | Family 2BR w/kitchen & laundry
Opened in the summer of 2021, this apartment hotel was designed by a well-known Japanese designer. The building has 9 floors and 16 Quad rooms, ideal for families or small groups of 4–5 guests. The hotel is located along the main road near Senso-ji Temple and Asakusa Shrine. Front desk hours: 10:00 AM – 8:00 PM Online customer support: 8:00 PM – 12:00 AM Late-night front desk service: 10:00 PM – 6:00 AM (available on five nights per week)

1 min from Koenji Station/BnA Koenji Room 2F
BnA Home Koenji is an independent art hotel created by the Bed & Art Project (BnA)—an ambitious and experimental hospitality concept that blends art, community, and immersive travel. At BnA, guests don't just stay at a hotel—they stay inside a work of art. Each room is a one-of-a-kind collaboration, designed and built by local artists, architects, textile designers, and carpenters to create a deeply personal and unforgettable experience.

No Service Hotel 301 / 7 min to Asakusa
“NO SERVICE HOTEL” is a small design hotel with only 2 rooms close to Asakusa. A cozy hotel along Kokusai Street. There are many attractive sights and restaurants nearby. Please enjoy the experience that is possible only because of its excellent location and small hotel. The hotel with only 2 rooms is located near Asakusa and you can relax. There is no special service, but you will enjoy a comfortable space just for you.

TheMillennialsShibuya/Mixed Smart Pod/1 Guest
Welcome to The Millennials Shibuya, a futuristic accommodation facility equipped with the world's first IOT-equipped "Smart Pod" and a lounge with a coworking space. In addition, there are plenty of common spaces, including a 24-hour shared lounge, a 24-hour self-kitchen, a 24-hour working lounge, a shared shower and toilet, and a shared laundry. 20% of the total area of the hotel is allocated to the common area.
Popular amenities for Shinjuku boutique hotels
Family-friendly boutique hotels

condominium with everything you need for dailylife

4 subway 5 min walk! Japanese style Tatami&Futon

Entire Floor for 8 · 540sqft · Near Tokyo Tower

【IKOI_203】Well-Equipped Hidden Gem: Hibiya Line

[1]2min walk Sta丨Shinjuku area丨free WIFI丨Single丨

Tokyo Home near Disney for 2|Cozy Room|Kitchen

Spacious Ueno Stay|Subway 1min|Zoo & Museums|6p

Luxury beds/10 min walk Shibuya/2 showers/5 beds
Boutique hotels with a patio

TheMillennialsShibuya/Smart Pod Girls Only/1 Guest

5 min walk to Skytree Station, 100 inch projection screen in the movie room, direct access to the airport, kitchen, washing machine, bathtub

Washing Machine, Apartment Suite, 5 Min Walk to Skytree Station, Direct Access to Airport, Kitchen, Nearby Izakaya, Amin Hotel

8 min to Yamanote Line | 3BR Family Suite | 49㎡

5 min walk to Skytree Station, direct access to airport and Disney, kitchen, washing machine, wifi, elevator, Amin Hotel

8 min to Yamanote Line | 6 Guests | 45㎡ | 2BR
Other boutique hotel holiday rentals

4 single beds in Tokyo/2 train stations: Studio B

2 New! /Organic stay/With a café/15 minutes to Shibuya/4 minutes to Meguro/6 minutes on foot to the station/ MAX 5 people

3F|8 minutes on foot from Shibuya Station! A hideaway for playing in Shibuya | Near live house | Up to 6 people | WIFI | Washing machine and dryer

4minSta|51㎡ 2BR|Gas Dryer|Hot Tub|Direct Airport

Hotel like 1 big house/Standard Twin②/3 people

Newly opened hotel-style t suite Subway 3 minutes

Shinjuku 15mins! Max 4ppl! No charge until 2ppl!

MANGADesign・2 mattress・Free simple breakfast& wifi
When is the best time to visit Shinjuku?
| Month | Jan | Feb | Mar | Apr | May | Jun | Jul | Aug | Sept | Oct | Nov | Dec |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg. price | $118 SGD | $117 SGD | $126 SGD | $162 SGD | $152 SGD | $143 SGD | $113 SGD | $93 SGD | $139 SGD | $141 SGD | $143 SGD | $127 SGD |
| Avg. temp | 6°C | 7°C | 10°C | 15°C | 19°C | 22°C | 26°C | 27°C | 24°C | 18°C | 13°C | 8°C |
Destinations to explore
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- Boutique hotels Tokyo Prefecture
- Boutique hotels Japan
- Tokyo Sta.
- Shibuya Station
- Tokyo Disneyland
- Ginza Station
- Asakusa Sta.
- Akihabara Sta.
- Shimo-Kitazawa Sta.
- Tokyo Disney Resort
- Ikebukuro
- Tokyo Skytree
- Nippori Sta.
- Yokohama Sta.
- Otsuka Station
- Ueno Sta.
- Oshiage Sta.
- Hakone-Yumoto Sta.
- Tokyo Tower
- Yoyogi Park
- Takadanobaba Sta.
- Kinshicho Sta.
- Akasaka Sta.
- Kita-Senju Sta.
- Shinagawa
- Omiya Sta.
- Things to do Shinjuku
- Sightseeing Shinjuku
- Art and culture Shinjuku
- Tours Shinjuku
- Nature and outdoors Shinjuku
- Food and drink Shinjuku
- Entertainment Shinjuku
- Sports activities Shinjuku
- Things to do Tokyo Prefecture
- Art and culture Tokyo Prefecture
- Nature and outdoors Tokyo Prefecture
- Tours Tokyo Prefecture
- Sightseeing Tokyo Prefecture
- Sports activities Tokyo Prefecture
- Food and drink Tokyo Prefecture
- Entertainment Tokyo Prefecture
- Wellness Tokyo Prefecture
- Things to do Japan
- Sports activities Japan
- Food and drink Japan
- Nature and outdoors Japan
- Tours Japan
- Wellness Japan
- Entertainment Japan
- Art and culture Japan
- Sightseeing Japan







