Boutique hotels in San Diego County

Find and book unique boutique hotels on Airbnb

Top-rated boutique hotels in San Diego County

Guests agree: these boutique hotels are highly rated for location, cleanliness and more.

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Guest favourite
A bright sleeping area features a spacious bed covered in crisp white linens, complemented by a plush accent pillow. Light wood furniture is arranged around the room, including a desk with a small television and a decorative plant, while natural light fills the space through a high ceiling.
Hotel room in Oceanside
4.93 out of 5 average rating, 208 reviews

Cozy Designer King Room Steps 2 Restaurants&Shops

Featured in T&L, Conde Nast, and the LATimes! Located in hip, tranquil South Oceanside - blocks to the beach and great restaurants - and Carlsbad Village. Complimentary with your stay: 1 parking space Anytime use of natural cedar hot tub Beach cruisers Surf & boogie boards A spacious, private, and relaxing patio/picnic/firepit area for lounging Hi speed WiFi Outdoor shower for rinsing off after the beach Great bar/restaurant (Heritage BBQ) & grocer next door Local Guide/Map No service fees

Guest favourite
A spacious pool area is highlighted by a sparkling swimming pool surrounded by a wooden deck. Comfortable lounge chairs are positioned nearby, with lush greenery and tall trees providing a serene backdrop. The space invites relaxation and enjoyment during warm days.
Hotel room in Julian
4.86 out of 5 average rating, 29 reviews

Summer Room @ Eaglenest Inn w/ Pool & SPA

Eaglenest Inn is a charming retreat offering three cozy guest rooms and a spacious two-bedroom suite, each equipped with a smart TV and a private bathroom for ultimate comfort. Guests can enjoy breathtaking views of the surrounding mountains or the serene garden. The inn offers the flexibility to book multiple rooms or the entire house, making it an ideal venue for get-togethers, special events, and celebrations such as rehearsal dinners, birthday parties, service anniversaries, and honeymoons.

Superhost
A cottage room is presented with a Queen bed featuring layered linens and decorative pillows. A gas fireplace is situated between the bed and a spacious bathroom area. Natural light enters through multiple windows, highlighting the warm wood accents and country decor.
Hotel room in Julian
4.7 out of 5 average rating, 20 reviews

Annie Elizabeth in Boutique Hotel

Experience the tranquil privacy of our 12 deluxe cottage rooms, each distinctively decorated to create a charming and intimate ambiance. Relax on your own porch, patio, or deck and savor Julian’s peaceful outdoors. The Annie Elizabeth cottage room features a Queen bed and a whirlpool bathtub, adding an extra touch to your accommodations. All cottage rooms are equipped with in-room refrigerators, gas fireplaces, coffee makers, free WiFi, and complimentary breakfast to ensure a comfortable stay.

Guest favourite
A spacious room features a stylish bed with decorative headboard and soft linens. A small coffee station is visible, accompanied by a chair and side table. Natural light filters through large windows, while curtains provide a gentle contrast to the industrial elements.
Hotel room in San Diego
4.98 out of 5 average rating, 55 reviews

Hotel Narcissus - Room 2

Hotel Narcissus is a brand new 6-Room Boutique Hotel in the Logan Heights neighborhood of San Diego and features a Mexican Fusion Restaurant and Speakeasy Cocktail Bar called Alchemy. Logan Heights is one of the most beloved urban neighborhoods in San Diego due to its eclectic art scene and close proximity to Downtown. Hotel Narcissus is located at the base of the Coronado Bridge, less than 1-Mile Southeast of Petco Park. It is a 5-10 minute bike ride and a 20-25 minute walk to Downtown.

Guest favourite
A refreshing swimming pool is set against a clear blue sky, surrounded by lounge chairs in a vibrant red hue. A shaded area is provided by a large umbrella, while palm trees and desert landscaping create a tranquil outdoor setting.
Hotel room in Borrego Springs
4.84 out of 5 average rating, 45 reviews

Borrego Springs Motel; New Level 2 EV Charger!

Cute 8 room motel with big pool and walking distance to restaurants. A true desert experience awaits! We have a big pool that you may have all to yourself. Our rooms have new mini split air conditioners which will keep you comfortable at any temperature. If you seek peace and quiet try us out. Swim, get a tan, read a book, relax, view the stars, marvel at the natural desert surroundings! If our room listed here is booked, call us directly as we have other rooms available.

Guest favourite
The illuminated Gaslamp Quarter entrance arch is captured at twilight. Streams of colorful light from passing vehicles create a dynamic scene. The surrounding buildings exhibit a mix of classic and contemporary architecture, contributing to the vibrant energy of this iconic San Diego neighborhood.
Hotel room in San Diego
4.94 out of 5 average rating, 17 reviews

San Diego Comicon Marriott Pulse-2 Bedroom Suite

Perfect for Comicon & Convention Center Events, the hotel is inspired by San Diego’s renowned Gaslamp Quarter, Enjoy the sleek, sophisticated setting to unwind from a day of exploration and recharge before venturing out to experience San Diego’s amazing nightlife. The suite includes 2 separate bedrooms and 2 separate living areas that are conjoined into one luxurious living space. With so much to see and do, you will need a place to come back to relax!

Hotel room in San Diego
5 out of 5 average rating, 4 reviews

Modern Gaslamp Studio | Bright Design + Walk to Ho

Stay steps from San Diego’s Gaslamp Quarter in this modern, light-filled studio built for easy city living. Perfect for up to three guests, it offers a plush queen bed, twin air mattress, and a full kitchen for casual meals in. Enjoy fast WiFi, Smart TV, and climate control in a secure building. With Petco Park, Balboa Park, and the Convention Center all nearby, you’ll be perfectly positioned to explore the best of downtown while relaxing in style.

Superhost
A spacious studio features large windows allowing natural light to fill the room. A sleek black sofa is positioned in the living area, complemented by a wooden dining table in the background. A small kitchenette is visible, while the bedroom is accessible through a doorway.
Hotel room in San Diego
4.77 out of 5 average rating, 30 reviews

Enjoy Modern APT | Queen Bed + Full Kitchen

Explore all of San Diego’s beautiful downtown from this gorgeously restored historic hotel. Walk to everything … Gaslamp Quarter, Petco Park, Convention Center, world-class restaurants and lounges. … QUEEN Bed plus Queen Sofa Bed … 55" Samsung Smart TV - Direct TV is included … Efficiency Kitchen / Kitchenette … Air conditioning … High ceilings, ceiling fan … Fast free WIFI … Professionally cleaned & managed

Superhost
A modern guest room features two spacious beds with light-colored bedding and decorative pillows. A plush toy is positioned on one bed. The room is illuminated by bedside lamps, with sleek wooden panels providing a warm contrast to the textured wall.
Hotel room in San Diego

Hotel Z, Z 2 Queen Suite Mobility Accessible w/Tub

You’ll get your much needed pampering experience when staying in the comfy accommodations at Hotel Z. Located in San Diego’s Gaslamp Quarter, we provide you with modern rooms full of signature amenities from our Stayppineapple Hotel brand that will ensure an exciting stay. We’ll even help you with getting around the city. An amenity fee with tax ($28.09 per day) will be charged upon arrival.

Guest favourite
A red door with glass panels is framed by greenery, leading to the entrance of Oak Hill Inn. Steps made of stone are visible, surrounded by climbing ivy and sunlight filtering through nearby leaves.
Hotel room in Julian
4.94 out of 5 average rating, 227 reviews

Carriage House suite #2

The mountains are calling.... Oak Hill Inn offers 3 charming rooms each with private entrance and bathroom. The perfect location with a short 5 min. walk to the heart of down town. Our Inn boasts rustic charm with modern comforts. We're family owned and operated for over 30 year and take pride in making our guest feel welcome!

A spacious room features a large bed with a textured throw blanket and natural wood furnishings. Light streams in from a nearby opening, highlighting the neutral palette. A bathroom door and a closet are visible, contributing to the convenience of the space.
Hotel room in San Clemente
4.59 out of 5 average rating, 499 reviews

The Surfbreak Hotel- 1 king bed

Each of our rooms is designed to be a relaxing oasis after a long day at the beach or out on the town. Each room is equipped with a TV, free Wifi, mini fridge, coffee maker, air conditioning, and desk for your convenience. Pets are allowed for an additional fee.

A spacious guest room features a king bed with a blue throw blanket and decorative cushions. Natural light enters through a large window dressed with sheer curtains. A wooden chair and bedside tables with lamps provide additional comfort and functionality in the modern, light-colored decor.
Hotel room in San Diego
4.51 out of 5 average rating, 190 reviews

Standard King, Ground Floor - Sea Harbor Hotel

Standard King, Ground Floor - is perfectly catered for a nightly retreat or long term stay by the shore. The newly renovated room features one king bed, modern nautical aesthetics and premium furnishings for a memorable experience on the San Diego Marina.

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